All events will be held at SFU Harbour Centre, 555W Hastings St, Vancouver.
All joint sessions will be held in Room 1900 (Fletcher Challenge Theatre).
09:00 |
Welcome and introduction (joint) |
09:15 |
Keynote address (joint): |
10:15 |
Invited talk (joint): |
11:00 |
Coffee break (joint) |
11:15 |
Breakout session (separate short talks) |
12:30 |
Lunch - self-served, no catering will be provided |
14:00 |
Breakout session (separate short talks) |
15:30 |
Coffee break (joint) |
16:00 |
Breakout session (separate short talks) |
09:00 |
Keynote address (joint): |
10:00 |
Invited talk (joint): |
10:45 |
Coffee break |
11:00 |
Breakout session (separate short talks) |
12:30 |
Lunch - networking lunch, catering will be provided |
13:30 |
Poster session (joint) |
15:00 |
Invited talk (joint): |
15:45 |
Keynote address (joint): |
16:45 |
Closing remarks (joint) |
Breakout Sessions for RECOMB-seq
All RECOMB-seq sessions will be held in Room 1900 (Fletcher Challenge Theatre).
Saturday March 26
11:15 |
Breakout session (separate short talks) |
11:15 - 11:40 |
Genotyping common and
rare variation using overlapping pool sequencing |
11:45 - 12:05 |
Short talk: Improved Variant
Discovery and Allele Frequency Estimation from Pooled
DNA Resequencing with Bayesian Latent Class Analysis
and Compositional Bias Models |
12:05 - 12:25 |
Short talk: TavernaPBS:
Custom Next-Generation Sequence Analysis Workflows
using High-Performance Computing Resources with Taverna
and PBS |
12:30 |
Lunch |
14:00 |
Breakout session (separate short talks) |
14:00 - 14:30 |
Inferring Viral Spectrum
from 454 Pyrosequencing Reads |
14:30 - 14:50 |
Short talk: Separating
Metagenomic Data into Genomes via Clustering |
14:50 - 15:10 |
Short talk: Accurate Estimation
of Gene Expression Levels from DGE Sequencing Data |
15:10 - 15:30 |
Short talk: A Whole-Genome
Probe Design for Massively Parallel Variant Validation
using Selective Circularization |
15:30 |
Coffee break (joint) |
16:00 |
Breakout session (separate short talks) |
16:00 - 16:30 |
A Hidden Markov Model
for Copy Number Variant Prediction from Whole Genome
Resequencing Data |
16:30 - 16:50 |
Short talk: mTiM: margin-based
transcript mapping from RNA-seq |
16:50 - 17:10 |
Short talk: Modeling and
automation of sequencing-based determination of RNA
structure |
17:10 - 17:30 |
Short talk: Counting k-mers
with a Bloom Filter |
Sunday March 27
11:00 |
Breakout session (separate
short talks) |
11:00 - 11:30 |
Assembly of non-unique insertion
content using next-generation sequencing |
11:30 - 11:50 |
Short talk: Finding Deletions
with Exact Break Points from Noisy Low Coverage Paired-end
Short Sequence Reads |
11:50 - 12:10 |
Short talk: Contig graph
mining for duplication breakpoints |
12:10 - 12:30 |
Short talk: Constrained
traversal of repeats with paired sequences |
12:30 |
Lunch |
Breakout Sessions for RECOMB-CCB
All RECOMB-CCB sessions will be held in Room 1700 (Labatt Hall).
Saturday March 26
11:15 |
Breakout session (separate short talks) |
11:15 - 11:40 |
Analyzing
the genome of the Tasmanian Devil and its transmissible
cancer |
11:45 - 12:05 |
RNA-Seq
profiling of prostate tumors identify subtype specific
splice signatures and metastasis associated splice
patterns |
12:05 - 12:25 |
Sequence-Based
Profiling of Prostate Tumours |
12:30 |
Lunch |
14:00 |
Breakout session (separate short talks) |
14:00 - 14:25 |
Predicting
Chemotherapeutic Response Using Optimally Discriminative
Subnetworks |
14:25 - 14:50 |
Computational
purification of tumor gene expression profiles leads
to predictive models of patient outcome |
15:30 |
Coffee
break (joint) |
16:00 |
Breakout session (separate short talks) |
16:00 - 16:25 |
AInferring
Candidate Somatic Deletions using Short-Reads Combined
from Normal and Mixed Samples |
16:25 - 16:50 |
A
Bayesian approach for sensitive detection of somatic
genomic alterations from next-generation sequencing
of clinical cancer specimens |
16:50 - 17:15 |
Detecting
Somatic Mutations In Tumour/Normal Paired Sample Sequence
Data |
17:15 - 17:30 |
Accurate
somatic point mutation prediction using supervised
machine learning algorithms |
Sunday March 27
11:00 |
Breakout session (separate
short talks) |
11:00 - 11:25 |
Reconstructing Cancer Genome
Organization from Paired End Sequencing |
11:25 - 11:50 |
A systematic assessment
of associations among chromosomal aberrations in cancer
karyotypes |
11:50 - 12:15 |
Statistical approaches for
detecting genomic aberrations in heterogeneous tumor
samples from single nucleotide polymorphism genotyping
data |
12:15 - 12:30 |
deFuse: an algorithm for
gene fusion discovery in tumor RNA-Seq data |
12:30 |
Lunch |